SPAdes – Center for Algorithmic Biotechnology
Protocol to analyze the bacterial pangenome using PAN2HGENE software - ScienceDirect
The CQLS infrastructure and you - CQLS Analyst Blog
De Novo Assembly Tutorial | Geneious Prime
SPAdes and Unicycler not working for hybrid Assembly · Issue #574 · ablab/ spades · GitHub
SPAdes – Center for Algorithmic Biotechnology
memory - Low RAM for application in Linux - Super User
de novo assembly of PacBio reads (unix) - Bioinformatics Documentation
Benchmarking and Assessment of Eight De Novo Genome Assemblers on Viral Next-Generation Sequencing Data, Including the SARS-CoV-
NucMerge: Genome assembly quality improvement assisted by alternative assemblies and paired-end Illumina reads | bioRxiv
gapFinisher: A reliable gap filling pipeline for SSPACE-LongRead scaffolder output | PLOS ONE
Genome assembler Spades can not run properly! · Issue #1 · kapsakcj/win10- linux-conda-how-to · GitHub
SPAdes test fails on ubuntu 20.4 on wsl2 · Issue #649 · ablab/spades · GitHub
![virMine: automated detection of viral sequences from complex metagenomic samples [PeerJ]](https://dfzljdn9uc3pi.cloudfront.net/2019/6695/1/fig-1-full.png "virMine: automated detection of viral sequences from complex metagenomic samples [PeerJ]")
virMine: automated detection of viral sequences from complex metagenomic samples [PeerJ]
gapFinisher: A reliable gap filling pipeline for SSPACE-LongRead scaffolder output | PLOS ONE
Choice of assembly software has a critical impact on virome characterisation | Microbiome | Full Text
Frontiers | Acceleration of the SPADE Method Using a Custom-Tailored FP-Growth Implementation
Bioinformatics Tools | Genome Assembly | Install spades in linux using anaconda - YouTube
Need help for de novo assembly
Genome Assembly – Week 3 NGS 2015 | Lisa K. Johnson
Sequence assembly and mapping with MIRA 5
HGA: de novo genome assembly method for bacterial genomes using high coverage short sequencing reads | BMC Genomics | Full Text
GATOOL - Genome Assembly Tool
Using SPAdes De Novo Assembler - Prjibelski - 2020 - Current Protocols in Bioinformatics - Wiley Online Library
Protocol to analyze the bacterial pangenome using PAN2HGENE software - ScienceDirect
Genome Assembly Tutorial with SPADes | llumina Reads | SPAdes | Bioinformatics for Beginners - YouTube
SAUTE- New assembler for sequence assembly using target enrichment — Bioinformatics Review
